Visualizations

Network & pathway visualizations

Protein-protein interaction data from STRING, signaling networks from SIGNOR, and drug-gene interaction data from DGIdb all trigger interactive network viewers automatically. Pathway-level diagrams can also be requested as publication-quality figures.

Network Graph Icon

Network Graph

Interactive force-directed / hierarchical graph for protein-protein interactions, drug-gene networks, signaling cascades, and pathway cross-talk.

Triggered by: STRING, SIGNOR, DGIdb, Reactome interaction data

Hierarchical Edge Bundling Icon

Hierarchical Edge Bundling

Radial layout with bundled edges for hierarchical networks — pathway cross-talk, kinase family interactions, GO category relationships.

Ask: "Show pathway cross-talk as a bundling diagram"

Arc Diagram Icon

Arc Diagram

Linear node layout with arc connections — domain-domain interactions, protein sequence contacts, sequential network data.

Ask: "Show domain interactions as an arc diagram"